1 - 4
- International Workshop on the Synthesis and Simulation of Living Systems (4th : 1994 : Massachusetts Institute of Technology)
- Cambridge, Mass. : MIT Press, ©1994.
- Description
- Book — 1 online resource (xii, 444 pages) : illustrations (some color)
- Summary
-
- Plenary Talks
- Evolutionary Systems for Brain Communications -- Towards an Artificial Brain / Katsunori Shimohara
- Emergent Functionality in Robotic Agents through On-Line Evolution / Luc Steels
- Long Papers
- Artificial Fishes with Autonomous Locomotion, Perception, Behavior, and Learning in a Simulated Physical World / Demetri Terzopoulos, Xiaoyuan Tu and Radek Grzeszczuk
- Evolving 3D Morphology and Behavior by Competition / Karl Sims
- Altruism in the Evolution of Communication / David H. Ackley and Michael L. Littman
- Evolution of Metabolism for Morphogenesis / Hiroaki Kitano
- Competition, Coevolution and the Game of Tag / Craig W. Reynolds
- In Praise of Interactive Emergence, or Why Explanations Don't Have to Wait for Implementations / Horst Hendriks-Jansen
- Spencer and Dewey on Life and Mind / Peter Godfrey-Smith
- Crossovers Generate Non-Random Recombinants under Darwinian Selection / Gene Levinson
- Steps Towards Co-Evolutionary Classification Neural Networks. / Jan Paredis
- Self-Organisation in a System of Binary Strings / Wolfgang Banzhaf
- Effects of Tree Size on Travelband Formation in Orang-Utans: Data Analysis Suggested by a Model Study / Irenaeus J.A. te Boekhorst and Pauline Hogeweg
- A Biologically Inspired Immune System for Computers / Jeffrey O. Kephart
- Egrets of a Feather Flock Together / Yukihiko toquenaga, Isamu Kajitani and Tsutomu Hoshino
- A Model of the Effects of Dispersal Distance on the Evolution of Virulence in Parasites / C.C. Maley
- Innate Biases and Critical Periods: Combining Evolution and Learning in the Acquisition of Syntax / John Batali
- Dynamics of Self-Assembling Systems -- Analogy with Chemical Kinetics / Kazuo Hosokawa, Isao Shimoyama and Hirofumi Miura
- From Local Actions to Global Tasks: Stigmergy and Collective Robotics / R. Beckers, O.E. Holland and J.L. Deneubourg
- How to Evolve Autonomous Robots: Different Approaches in Evolutionary Robotics / Stefano Nolfi, Dario Floreano, Orazio Miglino and Francesco Mondada
- Evolving Visual Routines / Michael Patrick Johnson, Pattie Maes and Trevor Darrell
- Evolving Sensors in Environments of Controlled Complexity / Filippo Menczer and Richard K. Belew
- Traffic at the Edge of Chaos / Kai Nagel and Steen Rasmussen
- A Phase Transition in Random Boolean Networks / James F. Lynch
- Toward an Evolvable Model of Development for Autonomous Agent Synthesis / Frank Dellaert and Randall D. Beer
- Bifurcation Structure in Diversity Dynamics / Mark A. Bedau and Alan Bahm
- On Modelling Life / Chris Adami
- Short Papers
- Genes, Phenes and the Baldwin Effect: Learning and Evolution in a Simulated Population / Robert M. French and Adam Messinger
- Evolving Multi-Cellular Artificial Life / Kurt Thearling and Thomas S. Ray
- Meshing of Engineering Domains by Meitotic Cell Division / Kazuhiro Saitou and Mark J. Jakiela
- Simulating Natural Spacing Patterns of Insect Bristles Using a Network of Interacting Celloids / Hiroaki Inayoshi
- Character Recognition Agents / Lija Zhou and Stan Franklin
- The Building Behavior of Lattice Swarms / Eric Bonabeau, Guy Theraulaz, Eric Arpin and Emmanuel Sardet
- Modeling Adaptive Self-Organization / Jari Vaario
- Robot Herds: Group Behaviors for Systems with Significant Dynamics / Jessica K. Hodgins and David C. Brogan
- A Futures Market Simulation with Non-Rational Participants / Michael de la Maza and Deniz Yuret
- Evolutionary Differentiation of Learning Abilities -- a case study on optimizing parameter values in Q-Learning by a Genetic Algorithm / Tatsuo Unemi, Masahiro Nagayoshi, Nobumasa Hirayama, Toshiaki Nade, Kiyoshi Yano and Yasuhiro Masuhima
- Exploring the Foundations of Artificiall Societies: Experiments in Evolving Solutions to Iterated N-Player Prisoner's Dilemma / Steve Bankes
- Evolutionary Dynamics of Altruistic Behavior in Optional and Compulsory Versions of the Iterated Prisoner's Dilemma / John Batali and Philip Kitcher
- Evolving Cooperation in the Non-Iterated Prisoner's Dilemma: The Importance of Spatial Organization / Mihcael Oliphant
- An Alternate Interpretation of the Iterated Prisoner's Dilemma and the Evolution of Non-Mutual Cooperation / Peter J. Angeline
- Asymmetric Mutations Due to Semiconservative DNA Replication: Double-stranded DNA Type Genetic Algorithms / Hirofumi Doi, Ken-nosuke Wada and Mitsuru Furusawa
- Embryological Development on Silicon / P. Marchal, C. Piguet, D. Mange, A. Stauffer and S. Durand
- Development and Evolution of Hardware Behaviors / Hitoshi Hemmi, Jun'ichi Mizoguchi and Katsunori Shimohara
- Evolutionary Learning in the 2D Artificial Life System "Avida" / Chris Adami and C. Titus Brown
- Asynchrony Induces Stability in Cellular Automata Based models / Hugues Bersini and Vincent Detours
- Evolutionary Automata / Murray Shanahan
- Non-Uniform Cellular Automata: Evolution in Rule Space and Formation of Complex Structures / Moshe Sipper
- Evolutionary Robots: Our Hands In Their Brains? / James V. Stone
- Universality Without Matter? / Alvaro Moreno, Arantza Etxeberria and Jon Umerez
- Emergent Phenomena and Complexity / Vince Darley
- Autonomy vs. Environmental Dependency in Neural Knowledge Representation / Markus F. Peschi
- Adiversity Stepping Up Trophic Levels / Takuya Saruwatari, Yukihiko Toquenaga and Tsutomu Hoshino
- Artificial Culture / Nicholas Gessler
- Explorations in The Emergence of Morphology and Locomotion Behavior in Animated Characters / Jeffrey Ventrella
- An Instance of a Parasitic Replicator / Alun Rhys Jones and Adrian J. West.
(source: Nielsen Book Data)
- Computational Systems Bioinformatics Conference (5th : 2006 : Stanford, Calif.)
- London : Imperial College Press, ©2006.
- Description
- Book — 1 online resource (xvi, 400 pages) : illustrations (some color) Digital: data file.
- Summary
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- Committees
- Referees
- Preface
- Keynote Addresses. Exploring the ocean's microbes: sequencing the seven seas / Marvin E. Frazier [and others]. Don't know much about philosophy: the confusion over bio-ontologies / Mark A. Musen
- Invited talks. Biomedical Informatics Research Network (BIRN): building a national collaboratory for bioMedical and brain research / Mark H. Ellisman. Protein network comparative genomics / Trey Ideker. Systems biology in two dimensions: understanding and engineering membranes as dynamical systems / Erik Jakobsson. Bioinformatics at Microsoft Research / Simon Mercer. Movie crunching in biological dynamic imaging / Jean-Christophe Olivo-Marin. Engineering nucleic acid-based molecular sensors for probing and programming cellular systems / Christina D. Smolke. Reactome: a knowledgebase of biological pathways / Lincoln Stein [and others]
- Structural bioinformatics. Effective optimization algorithms for fragment-assembly based protein structure prediction / Kevin W. DeRonne and George Karypis. Transmembrane helix and topology prediction using hierarchical SVM classifiers and an alternating geometric scoring function / Allan Lo [and others]. Protein fold recognition using the gradient boost algorithm / Feng Jiao [and others]. A graph-based automated NMR backbone resonance sequential assignment / Xiang Wan and Guohui Lin. A data-driven, systematic search algorithm for structure determination of denatured or disordered proteins / Lincong Wang and Bruce Randall Donald. Multiple structure alignment by optimal RMSD implies that the average structure is a consensus / Xueyi Wang and Jack Snoeyink. Identification of?-Helices from low resolution protein density maps / Alessandro Dal Palu [and others]. Efficient annotation of non-coding RNA structures including pseudoknots via automated filters / Chunmei Liu [and others]. Thermodynamic matchers: strengthening the significance of RNA folding energies / Thomas Hochsmann, Matthias Hochsmann and Robert Giegerich
- Microarray data analysis and applications. PEM: a general statistical approach for identifying differentially expressed genes in time-course cDNA microarray experiment without replicate / Xu Han, Wing-Kin Sung and Lin Feng. Efficient generalized matrix approximations for biomarker discovery and visualization in gene expression data / Wenyuan Li [and others]
- Computational genomics and genetics. Efficient computation of minimum recombination with genotypes (not haplotypes) / Yufeng Wu and Dan Gusfield. Sorting genomes by translocations and deletions / Xingqin Qi [and others]. Turning repeats to advantage: scaffolding genomic contigs using LTR retrotransposons / Ananth Kalyanaraman, Srinivas Aluru and Patrick S. Schnable. Whole genome composition distance for HIV-1 genotyping / Xiaomeng Wu [and others]. Efficient recursive linking algorithm for computing the likelihood of an order of a large number of generic markers / S. Tewari, S.M. Bhandarkar and J. Arnold. Optimal Imperfect Phylogeny Reconstruction and Haplotyping (IPPH) / Srinath Sridhar [and others]. Toward an algebraic understanding of haplotype inference by pure parsimony / Daniel G. Brown and Ian M. Harrower. Global correlation analysis between redundant probe sets using a large collection of Arabidopsis ATH1 expression profiling data / Xiangqin Cui and Ann Loraine
- Motif sequence identification. Distance-based identification of structure motifs in proteins using constrained frequent subgraph mining / Jun Huan [and others]. An improved Gibbs sampling method for motif discovery via sequence weighting / Xin Chen and Tao Jiang. Detection of cleavage sites for HIV-1 protease in native proteins / Liwen You. A methodology for motif discovery employing iterated cluster re-assignment / Osman Abul, Finn Drabls and Geir Kjetil Sandve
- Biological pathways and systems. Identifying biological pathways via phase decomposition and profile extraction / Yi Zhang and Zhidong Deng. Expectation-maximization algorithms for fuzzy assignment of genes to cellular pathways / Liviu Popescu and Golan Yona. Classification of Drosophila embryonic developmental stage range based on gene expression pattern images / Jieping Ye [and others]. Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the internet / Qiaofeng Yang [and others]
- Protein functions and computational proteomics. Cavity-aware motifs reduce false positives in protein function prediction / Brian Y. Chen [and others]. Protein subcellular localization prediction based on compartment-specific biological features / Chia-Yu Su [and others]. Predicting the binding affinity of MHC class II peptides / Fatih Altiparmak, Altuna Akalin and Hakan Ferhatosmanoglu. Codon-based detection of positive selection can be biased by heterogeneous distribution of polar amino acids along protein sequences / Xuhua Xia and Sudhir Kumar. Bayesian data integration: a functional perspective / Curtis Huttenhower and Olga G. Troyanskaya. An iterative algorithm to quantify the factors influencing peptide fragmentation for MS/MS spectrum / Chungong Yu [and others]. Complexity and scoring function of MS/MS Peptide De Novo sequencing / Changjiang Xu and Bin Ma
- Biomedical applications. Expectation-maximization method for reconstructing tumor phylogenies from single-cell data / Gregory Pennington [and others]. Simulating in vitro epithelial morphogenesis in multiple environments / Mark R. Grant, Sean H.J. Kim and C. Anthony Hunt. A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history / Ray S. Lin [and others]. A systems biology case study of ovarian cancer drug resistance / Jake Y. Chen [and others].
- ECAL 2007 (2007 : Lisbon, Portugal)
- Berlin ; New York : Springer, 2007.
- Description
- Book — 1 online resource (xviii, 1215 pages) : illustrations Digital: text file.PDF.
- Summary
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- Artificial Chemistries, Pre-biotic Evolution.- Chemical Organizations at Different Spatial Scales.- Formulating Membrane Dynamics with the Reaction of Surface Objects.- Multi-level Selectional Stalemate in a Simple Artificial Chemistry.- Simulation Model for Functionalized Vesicles: Lipid-Peptide Integration in Minimal Protocells.- Evolution.- Emergence of Genetic Coding: An Information-Theoretic Model.- Emergent Phenomena Only Belong to Biology.- Genotype Editing and the Evolution of Regulation and Memory.- Investigating the Emergence of Phenotypic Plasticity in Evolving Digital Organisms.- Simulation of the Evolution of Aging: Effects of Aggression and Kin-Recognition.- Ecosystems.- Artificial Ecosystem Selection for Evolutionary Optimisation.- Building Virtual Ecosystems from Artificial Chemistry.- Energy Flows and Maximum Power on an Evolutionary Ecological Network Model.- Entropy Production in Ecosystems.- Increasing Complexity Can Increase Stability in a Self-Regulating Ecosystem.- Niche Differentiation and Coexistence in a Multi-resource Ecosystem with Competition.- Variance in Water Temperature as a Factor in the Modelling of Starfish and Mussel Population Density and Diversity.- Morphodynamics, Development.- Cell Tracking: Genesis and Epigenesis in an Artificial Organism.- Developmental Neural Heterogeneity Through Coarse-Coding Regulation.- Re-examination of Swimming Motion of Virtually Evolved Creature Based on Fluid Dynamics.- Adaptive Behavior.- Adaptation to Sensory Delays.- Adapting to Your Body.- An Analysis of Behavioral Attractor Dynamics.- Artificial Emotions: Are We Ready for Them?.- Evolution of an Adaptive Sleep Response in Digital Organisms.- Where Did I Put My Glasses? Determining Trustfulness of Records in Episodic Memory by Means of an Associative Network.- Grounding Action-Selection in Event-Based Anticipation.- Learning and Evolution.- Aging in Artificial Learning Systems.- An Analysis of the Effects of Lifetime Learning on Population Fitness and Diversity in an NK Fitness Landscape.- Embodied Evolution and Learning: The Neglected Timing of Maturation.- Evolution and Learning in an Intrinsically Motivated Reinforcement Learning Robot.- Evolving Cultural Learning Parameters in an NK Fitness Landscape.- How Does Niche Construction Reverse the Baldwin Effect?.- Improving Search Efficiency in the Action Space of an Instance-Based Reinforcement Learning Technique for Multi-robot Systems.- Improving Agent Localisation Through Stereotypical Motion.- Neuroevolution of Agents Capable of Reactive and Deliberative Behaviours in Novel and Dynamic Environments.- On the Adaptive Disadvantage of Lamarckianism in Rapidly Changing Environments.- The Dynamics of Associative Learning in an Evolved Situated Agent.- Communication, Constitution of Meaning, Language.- Constructing the Basic Umwelt of Artificial Agents: An Information-Theoretic Approach.- Directed Evolution of Communication and Cooperation in Digital Organisms.- Evolution of Acoustic Communication Between Two Cooperating Robots.- Group Size Effects on the Emergence of Compositional Structures in Language.- Language Learning Dynamics: Coexistence and Selection of Grammars.- Multi-level Selection in the Emergence of Language Systematicity.- Protolanguages That Are Semi-holophrastic.- From the Outside-In: Embodied Attention in Toddlers.- Agency, Autopoiesis, Autonomy.- Autonomy: A Review and a Reappraisal.- Category Theoretical Distinction Between Autopoiesis and (M, R) Systems.- Measuring Autonomy by Multivariate Autoregressive Modelling.- Minimal Agency Detection of Embodied Agents.- Alife and Art.- Hermeneutic Resonance in Animats and Art.- Robotic Superstrings Installation: A-Life Science & Art.- Dynamics of Social Systems, Collective Behavior.- A Distributed Formation Algorithm to Organize Agents with No Coordinate Agreement.- A Multi-level Selection Model for the Emergence of Social Norms.- Evolution of Cooperation in a Population of Selfish Adaptive Agents.- Evolutionary Dilemmas in a Social Network.- Exogenous Fault Detection in a Collective Robotic Task.- From Artificial Societies to New Social Science Theory.- From Solitary to Collective Behaviours: Decision Making and Cooperation.- Individual Selection for Cooperative Group Formation.- Institutional Robotics.- Investigating the Evolution of Cooperative Behaviour in a Minimally Spatial Model.- Modeling Decentralized Organizational Change in Honeybee Societies.- Social Facilitation on the Development of Foraging Behaviors in a Population of Autonomous Robots.- Social Impact Theory Based Optimizer.- The Role of Collective Reproduction in Evolution.- Fear and the Behaviour of Virtual Flocking Animals.- Swarm and Ant Colony Systems.- Comparing ACO Algorithms for Solving the Bi-criteria Military Path-Finding Problem.- Decentralized Control and Interactive Design Methods for Large-Scale Heterogeneous Self-Organizing Swarms.- EcoPS - a Model of Group-Foraging with Particle Swarm Systems.- Efficient Multi-foraging in Swarm Robotics.- Modelling the Effects of Colony Age on the Foraging Behaviour of Harvester Ants.- Robotics and Autonomous Agents: Concepts and Applications.- A Mechanism to Self-Assemble Patterns with Autonomous Robots.- Binocular Vision-Based Robot Control with Active Hand-Eye Coordination.- Controlling an Anthropomimetic Robot: A Preliminary Investigation.- Evolution of Neural Networks for Active Control of Tethered Airfoils.- Feathered Flyer: Integrating Morphological Computation and Sensory Reflexes into a Physically Simulated Flapping-Wing Robot for Robust Flight Manoeuvre.- Guided Self-organisation for Autonomous Robot Development.- Near-Optimal Mobile Robot Recharging with the Rate-Maximizing Forager.- Neural Uncertainty and Sensorimotor Robustness.- Simulations of Simulations in Evolutionary Robotics.- Synthesizing Physically-Realistic Environmental Models from Robot Exploration.- The Evolution of Pain.- Evolutionary Computation.- A Computational Morphogenesis Approach to Simple Structure Development.- Program Evolvability Under Environmental Variations and Neutrality.- The Creativity Potential Within Evolutionary Algorithms.- The Problems with Counting Ancestors in a Simple Genetic Algorithm.- Networks, Cellular Automata, Complex Systems.- Asynchronous Graph-Rewriting Automata and Simulation of Synchronous Execution.- Catalysis by Self-Assembled Structures in Emergent Reaction Networks.- Community Detection in Complex Networks Using Collaborative Evolutionary Algorithms.- Detecting Non-trivial Computation in Complex Dynamics.- Evolution of One-Dimensional Cellular Automata by 1/f Noise.- Genotype Reuse More Important than Genotype Size in Evolvability of Embodied Neural Networks.- Information-Cloning of Scale-Free Networks.- MBEANN: Mutation-Based Evolving Artificial Neural Networks.- Measuring Entropy in Embodied Neural Agents with Homeostasic Units: A Link Between Complexity and Cybernetics.- Networks Regulating Networks: The Effects of Constraints on Topological Evolution.- Preliminary Investigations on the Evolvability of a Non spatial GasNet Model.- Semi-synchronous Activation in Scale-Free Boolean Networks.- Spatial Embedding and Complexity: The Small-World Is Not Enough.- The Application of the Idea of Extended Cellular Automata for Some Pedestrian Behaviors.- Transients of Active Tracking: A Stroll in Attractor Spaces.- Wavelet Network with Hybrid Algorithm to Linearize High Power Amplifiers.- Models and Methodologies.- A Behavior-Based Model of the Hydra, Phylum Cnidaria.- A Computational System for Investigating Chemotaxis-Based Cell Aggregation.- A Signal Based Approach to Artificial Agent Modeling.- Construction of Hypercycles in Typogenetics with Evolutionary Algorithms.- Designing a Methodology to Estimate Complexity of Protein Structures.- Designing for Surprise.- Evolving Virtual Neuronal Morphologies: A Case Study in Genetic L-Systems Programming.- Folding Protein-Like Structures with Open L-Systems.- Formal Model of Embodiment on Abstract Systems: From Hierarchy to Heterarchy.- Neuro-evolution Methods for Designing Emergent Specialization.- Neutral Emergence and Coarse Graining.- New Models for Old Questions: Evolutionary Robotics and the `A Not B' Error.- PLAZZMID: An Evolutionary Agent-Based Architecture Inspired by Bacteria and Bees.- Self-organizing Acoustic Categories in Sensor Arrays.- Self-organizing Systems Based on Bio-inspired Properties.- Stepwise Transition from Direct Encoding to Artificial Ontogeny in Neuroevolution.- Symbiosis, Synergy and Modularity: Introducing the Reciprocal Synergy Symbiosis Algorithm.- Turing Complete Catalytic Particle Computers.
- (source: Nielsen Book Data)
(source: Nielsen Book Data)
- Australian Conference on Artificial Life (3rd : 2007 : Gold Coast, Qld.)
- Berlin ; New York : Springer, ©2007.
- Description
- Book — 1 online resource (xii, 402 pages) : illustrations Digital: text file.PDF.
- Summary
-
- Heuristics I.- Alternative Solution Representations for the Job Shop Scheduling Problem in Ant Colony Optimisation.- Analyzing the Role of "Smart" Start Points in Coarse Search-Greedy Search.- Concealed Contributors to Result Quality - The Search Process of Ant Colony System.- Ants Guide Future Pilots.- Complex Systems I.- Information Transfer by Particles in Cellular Automata.- An Artificial Development Model for Cell Pattern Generation.- Rounds Effect in Evolutionary Games.- Modelling Architectural Visual Experience Using Non-linear Dimensionality Reduction.- An Evolutionary Benefit from Misperception in Foraging Behaviour.- Simulated Evolution of Discourse with Coupled Recurrent Networks.- How Different Hierarchical Relationships Impact Evolution.- A Dual Phase Evolution Model of Adaptive Radiation in Landscapes.- Biological Systems I.- Directed Evolution of an Artificial Cell Lineage.- An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity.- Complement-Based Self-Replicated, Self-Assembled Systems (CBSRSAS).- Self-maintained Movements of Droplets with Convection Flow.- Structural Circuits and Attractors in Kauffman Networks.- The Effects of Learning on the Roles of Chance, History and Adaptation in Evolving Neural Networks.- Unsupervised Acoustic Classification of Bird Species Using Hierarchical Self-organizing Maps.- The Prisoner's Dilemma with Image Scoring on Networks: How Does a Player's Strategy Depend on Its Place in the Social Network?.- Heuristics II.- Population-Based Ant Colony Optimisation for Multi-objective Function Optimisation.- Mechanisms for Evolutionary Reincarnation.- An Evolutionary Algorithm with Spatially Distributed Surrogates for Multiobjective Optimization.- Examining Dissimilarity Scaling in Ant Colony Approaches to Data Clustering.- Complex Systems II.- A Framework for the Co-evolution of Genes, Proteins and a Genetic Code Within an Artificial Chemistry Reaction Set.- In-Formation Flocking: An Approach to Data Visualization Using Multi-agent Formation Behavior.- A Principled Approach to Swarm-Based Wall-Building.- Pattern Extraction Improves Automata-Based Syntax Analysis in Songbirds.- Heuristics III.- A Modified Strategy for the Constriction Factor in Particle Swarm Optimization.- A Differential Evolution Variant of NSGA II for Real World Multiobjective Optimization.- Investigating a Hybrid Metaheuristic for Job Shop Rescheduling.- Enhancements to Extremal Optimisation for Generalised Assignment.- Biological Systems II.- Identification of Marker Genes Discriminating the Pathological Stages in Ovarian Carcinoma by Using Support Vector Machine and Systems Biology.- Ancestral DNA Sequence Reconstruction Using Recursive Genetic Algorithms.
- (source: Nielsen Book Data)
(source: Nielsen Book Data)
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